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HCA Ingest Documentation
HCA Ingest Documentation
User documentation
Submit data flow
Spreadsheet quick guide
Submission State Diagram
Update via spreadsheet
Upload a new submission
Operations tasks
Operations Zenhub Board Pipeline and Process
Add an entry to our secrets stored on AWS
Create wrangler user in the wrangling EC2 instance
Delete project
How to force set a submission state
How to update GCP credentials of Ingest Exporter to access Terra staging area
Ingest release process
Investigate Stuck Submissions
Stuck in Exporting
Stuck in Submitted
Stuck in Validation
Manual Steps for Unpublishing schemas
Regular Tasks Checklist
Release Manager Runbook
Releasing HCA Ontology Service
Wrangler UI access
Admin and Setup
Adding Quay base image
Git secrets setup
Ingest CI/CD
Offboarding
Onboarding
Sprint planning
Terra staging area access
Upload service
ingest API
API Tokens
ingest UI
ingest API browser
Section for docs related to administration and setup of your environment.
Table of contents
Adding Quay base image
Git secrets setup
Ingest CI/CD
Offboarding
Onboarding
Sprint planning
Terra staging area access
Upload service